Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TOE1 ENSPTRG00000000672

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Description

target of EGR1, exonuclease [Source:VGNC Symbol;Acc:VGNC:48992]

Location

Chromosome 1: 44,885,374-44,889,945 forward strand.

Pan_tro_3.0:CM000314.3

About this gene

This gene has 3 transcripts (splice variants), 209 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000078406.1	TOE1-201	1572	523aa	ENSPTRP00000084060.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T4B2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000001278.3	TOE1-202	2393	510aa	ENSPTRP00000001160.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WV00 H2PYX1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000090580.1	TOE1-203	771	256aa	ENSPTRP00000090223.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G2HHM3	-

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Summary

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