Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: KPNA6 ENSPTRG00000000471

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Description

karyopherin subunit alpha 6 [Source:VGNC Symbol;Acc:VGNC:6900]

Location

Chromosome 1: 31,404,675-31,480,952 forward strand.

Pan_tro_3.0:CM000314.3

About this gene

This gene has 4 transcripts (splice variants), 208 orthologues and 12 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000101877.1	KPNA6-203	1665	554aa	ENSPTRP00000082364.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SZD9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSPTRT00000092975.1	KPNA6-204	3889	536aa	ENSPTRP00000064256.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RHW2	-
ENSPTRT00000105058.1	KPNA6-202	2438	533aa	ENSPTRP00000077692.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SL01	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSPTRT00000000924.5	KPNA6-201	2023	536aa	ENSPTRP00000000827.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XDT1 H2PYJ7	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,

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Summary

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