Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: CAPZB ENSPTRG00000000268

.

Description

capping actin protein of muscle Z-line subunit beta [Source:VGNC Symbol;Acc:VGNC:11304]

Location

Chromosome 1: 18,334,265-18,481,074 reverse strand.

Pan_tro_3.0:CM000314.3

About this gene

This gene has 4 transcripts (splice variants) and 205 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000081663.1	CAPZB-201	2604	301aa	ENSPTRP00000072044.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S4X4 A0A6D2Y255	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000059552.4	CAPZB-202	1889	277aa	ENSPTRP00000052739.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2W7V0 H2R9E0	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSPTRT00000107156.1	CAPZB-204	831	276aa	ENSPTRP00000069115.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RXR5	-
ENSPTRT00000110730.1	CAPZB-203	783	260aa	ENSPTRP00000080753.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SW01 A0A6D2XFV6	-

.

Summary

.

.