Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TARDBP ENSPTRG00000000136

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Description

TAR DNA binding protein [Source:VGNC Symbol;Acc:VGNC:10944]

Location

Chromosome 1: 10,463,719-10,476,430 forward strand.

Pan_tro_3.0:CM000314.3

About this gene

This gene has 9 transcripts (splice variants), 292 orthologues and 35 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000000310.5	TARDBP-201	4001	414aa	ENSPTRP00000000267.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XRF9 H2PY00	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000077242.1	TARDBP-205	1170	389aa	ENSPTRP00000090408.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SLV2	-
ENSPTRT00000079514.1	TARDBP-207	915	304aa	ENSPTRP00000063147.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RFJ1 A0A6D2WUC9	-
ENSPTRT00000088572.1	TARDBP-208	906	301aa	ENSPTRP00000092637.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TUH5 A0A6D2X469	-
ENSPTRT00000089333.1	TARDBP-209	900	299aa	ENSPTRP00000065269.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RKQ8	-
ENSPTRT00000077733.1	TARDBP-206	867	288aa	ENSPTRP00000079449.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RTD8	-
ENSPTRT00000105683.1	TARDBP-204	774	257aa	ENSPTRP00000062888.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RE22	-
ENSPTRT00000094093.1	TARDBP-203	255	84aa	ENSPTRP00000068348.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RVM3 A0A6D2XPY3	-
ENSPTRT00000105640.1	TARDBP-202	204	67aa	ENSPTRP00000072325.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SY60	-

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Summary

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