Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SMARCA2 ENSPTRG00000051168

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Description

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 [Source:VGNC Symbol;Acc:VGNC:57739]

Location

Chromosome 9: 1,975,931-2,139,483 forward strand.

Pan_tro_3.0:CM000323.3

About this gene

This gene has 9 transcripts (splice variants), 205 orthologues and 32 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000108096.1	SMARCA2-201	4767	1588aa	ENSPTRP00000062652.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RDE1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000098854.1	SMARCA2-202	4713	1570aa	ENSPTRP00000077077.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SJ96	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000104431.1	SMARCA2-203	4695	1564aa	ENSPTRP00000085105.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T782	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000077754.1	SMARCA2-204	4251	1416aa	ENSPTRP00000072063.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S5E4	-
ENSPTRT00000106017.1	SMARCA2-205	846	281aa	ENSPTRP00000083752.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2J8JH03 A0A6D2Y3H8	-
ENSPTRT00000086805.1	SMARCA2-207	837	278aa	ENSPTRP00000091159.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TPJ1 A0A6D2XGP3	-
ENSPTRT00000106187.1	SMARCA2-208	783	260aa	ENSPTRP00000090037.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TLC1 A0A6D2XTE6	-
ENSPTRT00000101931.1	SMARCA2-206	747	248aa	ENSPTRP00000087825.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TF50 A0A6D2X9Y8	-
ENSPTRT00000095237.1	SMARCA2-209	738	245aa	ENSPTRP00000082181.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SYX6	-

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Summary

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