Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: RORC ENSPTRG00000032436

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Description

RAR related orphan receptor C [Source:VGNC Symbol;Acc:VGNC:49010]

Location

Chromosome 1: 129,791,223-129,817,035 reverse strand.

Pan_tro_3.0:CM000314.3

About this gene

This gene has 4 transcripts (splice variants), 383 orthologues and 18 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000099847.1	RORC-204	1578	525aa	ENSPTRP00000082993.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T288	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSPTRT00000111237.1	RORC-202	3071	497aa	ENSPTRP00000071342.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S3D1 A0A6D2XDU6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000061551.3	RORC-201	3059	518aa	ENSPTRP00000054088.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WPB6 H2RAL9	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000108203.1	RORC-203	1536	511aa	ENSPTRP00000069225.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RWX6	-

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Summary

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