Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SHOX2 ENSPTRG00000023041

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Description

SHOX homeobox 2 [Source:UniProtKB Gene Name;Acc:A0A2I3TRE3]

Location

Chromosome 3: 161,665,818-161,676,564 reverse strand.

Pan_tro_3.0:CM000317.3

About this gene

This gene has 2 transcripts (splice variants), 193 orthologues and 58 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000078767.1	SHOX2-201	3761	343aa	ENSPTRP00000091815.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TRE3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSPTRT00000040063.6	SHOX2-202	3682	319aa	ENSPTRP00000037021.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2VTF0 H2QY89	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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