Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: MAMDC4 ENSPTRG00000021576

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Description

MAM domain containing 4 [Source:VGNC Symbol;Acc:VGNC:4781]

Location

Chromosome 9: 115,221,026-115,229,954 forward strand.

Pan_tro_3.0:CM000323.3

About this gene

This gene has 3 transcripts (splice variants), 94 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000039983.6	MAMDC4-202	3651	1216aa	ENSPTRP00000036945.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2X157 H2QY71	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000082817.1	MAMDC4-201	3724	1137aa	ENSPTRP00000084894.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T6L9 A0A6D2XG82	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000094855.1	MAMDC4-203	3591	1196aa	ENSPTRP00000063787.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RGN9	-

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Summary

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