Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: VAV2 ENSPTRG00000021525

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Description

vav guanine nucleotide exchange factor 2 [Source:VGNC Symbol;Acc:VGNC:4899]

Location

Chromosome 9: 112,055,283-112,305,469 reverse strand.

Pan_tro_3.0:CM000323.3

About this gene

This gene has 4 transcripts (splice variants), 208 orthologues and 24 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000101411.1	VAV2-203	5338	878aa	ENSPTRP00000084067.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T4A4 A0A6D2WXC8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000080529.1	VAV2-202	5306	868aa	ENSPTRP00000093109.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TV44 A0A6D2XFG6	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSPTRT00000078077.1	VAV2-201	5218	839aa	ENSPTRP00000091506.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XKX9 K7B5C6	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSPTRT00000039868.6	VAV2-204	2427	808aa	ENSPTRP00000036840.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2QY48	-

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Summary

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