Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: UBAP1 ENSPTRG00000020873

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Description

ubiquitin associated protein 1 [Source:VGNC Symbol;Acc:VGNC:4896]

Location

Chromosome 9: 34,925,532-35,001,538 forward strand.

Pan_tro_3.0:CM000323.3

About this gene

This gene has 4 transcripts (splice variants), 209 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000050204.5	UBAP1-201	2721	572aa	ENSPTRP00000043955.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2R2H2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSPTRT00000097837.1	UBAP1-202	2502	502aa	ENSPTRP00000076587.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SHW5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000081427.1	UBAP1-204	1521	506aa	ENSPTRP00000082850.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T0U8	-
ENSPTRT00000111009.1	UBAP1-203	1326	441aa	ENSPTRP00000062119.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RCI3	-

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Summary

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