Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: IKZF1 ENSPTRG00000019187

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Description

IKAROS family zinc finger 1 [Source:VGNC Symbol;Acc:VGNC:4399]

Location

Chromosome 7: 49,738,190-49,838,723 forward strand.

Pan_tro_3.0:CM000321.4

About this gene

This gene has 10 transcripts (splice variants), 208 orthologues and 11 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000035456.5	IKZF1-204	6637	519aa	ENSPTRP00000032781.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XU53 H2QUK7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000108124.1	IKZF1-203	6512	477aa	ENSPTRP00000091286.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2J8L916 A0A6D2VU80	-
ENSPTRT00000104363.1	IKZF1-201	6379	432aa	ENSPTRP00000080197.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2J8L923 A0A6D2W171	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSPTRT00000111263.1	IKZF1-202	6165	432aa	ENSPTRP00000085611.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T8N9 A0A6D2WUI9	-
ENSPTRT00000084073.1	IKZF1-205	1131	376aa	ENSPTRP00000072436.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S619 A0A6D2X4I2	-
ENSPTRT00000095653.1	IKZF1-209	1023	340aa	ENSPTRP00000073436.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S9D6	-
ENSPTRT00000109880.1	IKZF1-206	1011	336aa	ENSPTRP00000075957.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SG07 A0A6D2X860	-
ENSPTRT00000095526.1	IKZF1-207	885	294aa	ENSPTRP00000083455.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T3K0 A0A6D2W4Z8	-
ENSPTRT00000110066.1	IKZF1-210	873	290aa	ENSPTRP00000066682.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RPT7	-
ENSPTRT00000109068.1	IKZF1-208	807	268aa	ENSPTRP00000067982.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RUI2 A0A6D2X5Q1	-

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Summary

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