Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ACTB ENSPTRG00000018890

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Description

actin beta [Source:VGNC Symbol;Acc:VGNC:50814]

Location

Chromosome 7: 4,683,972-4,687,469 reverse strand.

Pan_tro_3.0:CM000321.4

About this gene

This gene has 4 transcripts (splice variants), 157 orthologues and 38 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000066712.3	ACTB-202	1137	378aa	ENSPTRP00000058292.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2RD45	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000042865.3	ACTB-201	1831	375aa	ENSPTRP00000039339.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2J8KJN5 Q5R1X3	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSPTRT00000081944.1	ACTB-204	1104	367aa	ENSPTRP00000085203.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T8J6	-
ENSPTRT00000096990.1	ACTB-203	888	295aa	ENSPTRP00000079280.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SQG5	-

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Summary

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