Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: RASA1 ENSPTRG00000017062

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Description

RAS p21 protein activator 1 [Source:VGNC Symbol;Acc:VGNC:7143]

Location

Chromosome 5: 28,273,448-28,398,086 reverse strand.

Pan_tro_3.0:CM000319.3

About this gene

This gene has 6 transcripts (splice variants), 221 orthologues and 10 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000031616.5	RASA1-201	4844	1047aa	ENSPTRP00000029205.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WFK1 H2QR74	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000083667.1	RASA1-203	3105	1034aa	ENSPTRP00000068276.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RU84	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000100180.1	RASA1-204	3087	1028aa	ENSPTRP00000091493.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TQG0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000085103.1	RASA1-202	2943	980aa	ENSPTRP00000078980.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SPT6	-
ENSPTRT00000105240.1	RASA1-206	2646	881aa	ENSPTRP00000077146.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SJR9 A0A6D2W3L0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000079021.1	RASA1-205	2643	880aa	ENSPTRP00000074903.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SCY6 A0A6D2X765	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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