Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: APOBEC3B ENSPTRG00000014384

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Description

apolipoprotein B mRNA editing enzyme catalytic subunit 3B [Source:VGNC Symbol;Acc:VGNC:12807]

Location

Chromosome 22: 25,523,185-25,586,671 forward strand.

Pan_tro_3.0:CM000335.3

About this gene

This gene has 6 transcripts (splice variants), 29 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000026877.3	APOBEC3B-204	1473	490aa	ENSPTRP00000024776.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2QLP5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSPTRT00000026883.4	APOBEC3B-205	1185	394aa	ENSPTRP00000024782.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2QLP8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000088480.1	APOBEC3B-203	1149	382aa	ENSPTRP00000082459.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SZP2	-
ENSPTRT00000026880.5	APOBEC3B-206	1045	190aa	ENSPTRP00000024779.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2QLP6	-
ENSPTRT00000026872.5	APOBEC3B-202	597	198aa	ENSPTRP00000024771.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2QLP4	-
ENSPTRT00000086743.1	APOBEC3B-201	597	198aa	ENSPTRP00000076561.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2QLP4	-

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Summary

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