Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: DLGAP4 ENSPTRG00000013457

.

Description

DLG associated protein 4 [Source:VGNC Symbol;Acc:VGNC:10483]

Location

Chromosome 20: 37,901,481-38,016,989 forward strand.

Pan_tro_3.0:CM000334.4

About this gene

This gene has 9 transcripts (splice variants), 331 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000047354.4	DLGAP4-201	4570	992aa	ENSPTRP00000046919.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2R4C0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000076734.1	DLGAP4-202	4561	989aa	ENSPTRP00000072601.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S6I7	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSPTRT00000079665.1	DLGAP4-203	4519	975aa	ENSPTRP00000075503.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SEP0	-
ENSPTRT00000084722.1	DLGAP4-205	4124	285aa	ENSPTRP00000075480.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SG69 A0A6D2XKE0	-
ENSPTRT00000095310.1	DLGAP4-204	3802	453aa	ENSPTRP00000080183.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	K7AT99	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSPTRT00000104993.1	DLGAP4-206	1362	453aa	ENSPTRP00000073322.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S8H5	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSPTRT00000099666.1	DLGAP4-207	957	318aa	ENSPTRP00000079479.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SR98	-
ENSPTRT00000093047.1	DLGAP4-208	738	245aa	ENSPTRP00000089576.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TK28	-
ENSPTRT00000110349.1	DLGAP4-209	477	158aa	ENSPTRP00000079561.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SRB1	-

.

Summary

.

.