Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PTPRS ENSPTRG00000010328

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Description

protein tyrosine phosphatase receptor type S [Source:VGNC Symbol;Acc:VGNC:10798]

Location

Chromosome 19: 5,413,714-5,492,874 reverse strand.

Pan_tro_3.0:CM000333.3

About this gene

This gene has 8 transcripts (splice variants), 86 orthologues and 40 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000018975.5	PTPRS-203	5847	1948aa	ENSPTRP00000017562.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XT74 H2QF28	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000083147.1	PTPRS-204	5733	1910aa	ENSPTRP00000082700.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2W8W6 K7C878	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000108074.1	PTPRS-205	5718	1905aa	ENSPTRP00000068777.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RVX8	-
ENSPTRT00000103736.1	PTPRS-207	5715	1904aa	ENSPTRP00000090303.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TM44	-
ENSPTRT00000092005.1	PTPRS-201	5664	1887aa	ENSPTRP00000091042.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TQ27	-
ENSPTRT00000105097.1	PTPRS-202	5613	1870aa	ENSPTRP00000092802.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TUY4	-
ENSPTRT00000085725.1	PTPRS-206	4518	1505aa	ENSPTRP00000071926.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S4H5 A0A6D2W209	-
ENSPTRT00000078170.1	PTPRS-208	387	128aa	ENSPTRP00000073147.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S804 A0A6D2WMP7	-

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Summary

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