Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: GFAP ENSPTRG00000009289

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Description

glial fibrillary acidic protein [Source:VGNC Symbol;Acc:VGNC:9296]

Location

Chromosome 17: 12,625,481-12,637,692 forward strand.

Pan_tro_3.0:CM000331.3

About this gene

This gene has 6 transcripts (splice variants), 203 orthologues and 80 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000094889.1	GFAP-203	1518	505aa	ENSPTRP00000062393.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RCP5 A0A6D2VSP0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSPTRT00000017063.5	GFAP-201	3179	432aa	ENSPTRP00000015793.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2J8IVB9 A0A6D2W6Z1	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000103001.1	GFAP-202	1928	431aa	ENSPTRP00000081576.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SXB2 A0A6D2WWK7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000096603.1	GFAP-204	1503	500aa	ENSPTRP00000086004.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TAV4	-
ENSPTRT00000083817.1	GFAP-205	1419	472aa	ENSPTRP00000062006.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RBI9 A0A6D2VY15	-
ENSPTRT00000099352.1	GFAP-206	1281	426aa	ENSPTRP00000062742.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RDM5	-

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Summary

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