Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SCFD1 ENSPTRG00000006235

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Description

sec1 family domain containing 1 [Source:VGNC Symbol;Acc:VGNC:3317]

Location

Chromosome 14: 14,379,080-14,486,550 forward strand.

Pan_tro_3.0:CM000328.3

About this gene

This gene has 5 transcripts (splice variants), 212 orthologues and 8 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000093179.1	SCFD1-201	2609	642aa	ENSPTRP00000075506.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SEQ4 A0A6D2XMZ1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000011437.4	SCFD1-202	1857	618aa	ENSPTRP00000010581.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2Q847	-
ENSPTRT00000106115.1	SCFD1-203	1845	614aa	ENSPTRP00000075786.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SH14	-
ENSPTRT00000091493.1	SCFD1-204	279	92aa	ENSPTRP00000091503.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TQH7 A0A6D2WTL3	-
ENSPTRT00000106424.1	SCFD1-205	168	55aa	ENSPTRP00000084834.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T6G3 A0A6D2W5B8	-

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Summary

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