Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TSC22D1 ENSPTRG00000005837

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Description

TSC22 domain family member 1 [Source:VGNC Symbol;Acc:VGNC:5128]

Location

Chromosome 13: 29,330,884-29,487,681 reverse strand.

Pan_tro_3.0:CM000327.3

About this gene

This gene has 5 transcripts (splice variants), 191 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000010731.4	TSC22D1-203	3219	1072aa	ENSPTRP00000009932.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XAR4 H2Q7I4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSPTRT00000093847.1	TSC22D1-205	3102	1033aa	ENSPTRP00000062883.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RE15	-
ENSPTRT00000076887.1	TSC22D1-201	1837	144aa	ENSPTRP00000084578.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2W5E2 K7D9C4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000105221.1	TSC22D1-202	1710	569aa	ENSPTRP00000069865.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RZ25 A0A6D2YCJ4	-
ENSPTRT00000077267.1	TSC22D1-204	387	128aa	ENSPTRP00000091208.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TQJ4	-

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Summary

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