Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: RNF34 ENSPTRG00000005558

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Description

ring finger protein 34 [Source:VGNC Symbol;Acc:VGNC:8526]

Location

Chromosome 12: 124,712,391-124,742,713 forward strand.

Pan_tro_3.0:CM000326.3

About this gene

This gene has 5 transcripts (splice variants), 280 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000068098.2	RNF34-205	1503	500aa	ENSPTRP00000059695.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2RE11	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000065206.2	RNF34-203	2157	373aa	ENSPTRP00000056771.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WEU5 H2RC51	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000010202.3	RNF34-204	1125	374aa	ENSPTRP00000009435.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2Q727	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000084374.1	RNF34-202	543	180aa	ENSPTRP00000073922.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SA39 A0A6D2XNZ1	-
ENSPTRT00000085068.1	RNF34-201	138	45aa	ENSPTRP00000092877.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TV65 A0A6D2WQ14	-

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Summary

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