Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ABTB3 ENSPTRG00000005398

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Description

ankyrin repeat and BTB domain containing 3 [Source:VGNC Symbol;Acc:VGNC:12798]

Gene Synonyms

BTBD11

Location

Chromosome 12: 110,290,677-110,639,602 forward strand.

Pan_tro_3.0:CM000326.3

About this gene

This gene has 4 transcripts (splice variants), 276 orthologues and 12 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000076520.1	ABTB3-201	3306	1101aa	ENSPTRP00000085448.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T8D3 A0A6D2XR05	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000009908.6	ABTB3-203	4128	641aa	ENSPTRP00000009161.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WCZ6 H2Q6S8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000101229.1	ABTB3-202	2949	982aa	ENSPTRP00000092586.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TTN9 A0A6D2VWU3	-
ENSPTRT00000097056.1	ABTB3-204	1590	529aa	ENSPTRP00000074827.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SEB1	-

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Summary

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