Summary
- Splice variants
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Gene: EEA1 ENSPTRG00000005295

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Description

early endosome antigen 1 [Source:VGNC Symbol;Acc:VGNC:5362]

Location

Chromosome 12: 95,454,338-95,629,000 reverse strand.

Pan_tro_3.0:CM000326.3

About this gene

This gene has 3 transcripts (splice variants) and 212 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000098712.1	EEA1-201	8164	1411aa	ENSPTRP00000075133.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SDM1 A0A6D2XXW6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000009732.7	EEA1-202	4236	1411aa	ENSPTRP00000008997.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2Q6L6	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000107707.1	EEA1-203	4209	1402aa	ENSPTRP00000067910.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RT78	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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