Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
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Ontologies
- GO: Anatomical entity
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Genetic Variation
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ID History
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Gene: C2CD5 ENSPTRG00000004767

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Description

C2 calcium dependent domain containing 5 [Source:VGNC Symbol;Acc:VGNC:8594]

Location

Chromosome 12: 68,354,174-68,450,279 forward strand.

Pan_tro_3.0:CM000326.3

About this gene

This gene has 4 transcripts (splice variants) and 206 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000099359.1	C2CD5-201	5013	1084aa	ENSPTRP00000093088.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TV84	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSPTRT00000092386.1	C2CD5-202	4720	1017aa	ENSPTRP00000062054.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RCB0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000090739.1	C2CD5-203	4590	1054aa	ENSPTRP00000064759.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RJD4	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000008806.5	C2CD5-204	4428	1000aa	ENSPTRP00000008137.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2Q5L5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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