Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
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- Structural variants
Gene expression
Pathway
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External references
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ID History
- Gene history

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Gene: EMC1 ENSPTRG00000000261

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Description

ER membrane protein complex subunit 1 [Source:VGNC Symbol;Acc:VGNC:530]

Location

Chromosome 1: 18,208,831-18,242,995 reverse strand.

Pan_tro_3.0:CM000314.3

About this gene

This gene has 4 transcripts (splice variants) and 204 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000059560.4	EMC1-201	4250	993aa	ENSPTRP00000052749.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XXX5 H2R9E3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000080634.1	EMC1-202	2964	987aa	ENSPTRP00000066812.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RQ67	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000102940.1	EMC1-203	2916	971aa	ENSPTRP00000090269.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TMX0 A0A6D2XX64	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000110093.1	EMC1-204	2685	894aa	ENSPTRP00000093519.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TWB9	-

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Summary

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