Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SYNJ1 ENSOARG00020000444

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Description

synaptojanin 1 [Source:HGNC Symbol;Acc:HGNC:11503]

Location

Primary_assembly 1: 123,504,115-123,598,920 forward strand.

ARS-UI_Ramb_v2.0:CM028704.1

About this gene

This gene has 8 transcripts (splice variants), 217 orthologues and 13 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSOART00020001346.2	SYNJ1-203	5070	1606aa	ENSOARP00020001111.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSOART00020001581.2	SYNJ1-206	6990	1559aa	ENSOARP00020001318.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSOART00020001653.2	SYNJ1-205	6815	1524aa	ENSOARP00020001379.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSOART00020001519.2	SYNJ1-208	6547	1406aa	ENSOARP00020001256.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSOART00020001485.2	SYNJ1-202	5035	1593aa	ENSOARP00020001224.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSOART00020001420.2	SYNJ1-204	5008	1310aa	ENSOARP00020001173.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSOART00020001385.2	SYNJ1-207	3956	1285aa	ENSOARP00020001146.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSOART00020063537.1	SYNJ1-201	967	311aa	ENSOARP00020062991.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data