Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: prpf38a ENSORLG00020002130

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Description

pre-mRNA processing factor 38A [Source:NCBI gene;Acc:101172647]

Location

Primary_assembly 4: 23,470,485-23,637,805 reverse strand.

ASM223471v1:CP020782.1

About this gene

This gene has 10 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSORLT00020013154.1	prpf38a-210	1463	309aa	ENSORLP00020001352.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B3H538 A0A3P9JYU0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSORLT00020013056.1	prpf38a-204	1462	281aa	ENSORLP00020022039.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B3H5C0 A0A3P9LMS2	-
ENSORLT00020013074.1	prpf38a-207	1321	309aa	ENSORLP00020001408.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B3HPJ1 A0A3P9LMT2	-
ENSORLT00020013024.1	prpf38a-201	1296	309aa	ENSORLP00020022049.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B3HPJ1 A0A3P9LMT2	-
ENSORLT00020013138.1	prpf38a-209	1287	281aa	ENSORLP00020022004.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3P9LMN6	-
ENSORLT00020013093.1	prpf38a-206	1272	309aa	ENSORLP00020001399.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B3H538 A0A3P9JYU0	-
ENSORLT00020013105.1	prpf38a-205	1272	309aa	ENSORLP00020022020.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B3H538 A0A3P9JYU0	-
ENSORLT00020013125.1	prpf38a-208	1216	296aa	ENSORLP00020022011.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3P9LMW7 H2MEA7	-
ENSORLT00020013035.1	prpf38a-202	1208	309aa	ENSORLP00020001434.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B3H538 A0A3P9JYU0	-
ENSORLT00020013045.1	prpf38a-203	1208	309aa	ENSORLP00020022044.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B3H538 A0A3P9JYU0	-

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Summary

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