Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: prpf38a ENSORLG00000013485

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Description

pre-mRNA processing factor 38A [Source:NCBI gene (formerly Entrezgene);Acc:445089]

Location

Primary_assembly 4: 23,599,415-23,729,268 reverse strand.

ASM223467v1:CP020668.1

About this gene

This gene has 6 transcripts (splice variants), 233 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSORLT00000037584.1	prpf38a-206	1721	309aa	ENSORLP00000026976.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B3H538 A0A3P9JYU0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSORLT00000045533.1	prpf38a-201	1437	309aa	ENSORLP00000033206.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B3HPJ1 A0A3P9LMT2	-
ENSORLT00000032712.1	prpf38a-202	1388	309aa	ENSORLP00000030881.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B3I8G1	-
ENSORLT00000043686.1	prpf38a-203	1388	309aa	ENSORLP00000040107.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B3I8G1	-
ENSORLT00000038614.1	prpf38a-204	1346	281aa	ENSORLP00000027134.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B3H5C0 A0A3P9LMS2	-
ENSORLT00000016913.2	prpf38a-205	1226	296aa	ENSORLP00000016912.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3P9LMW7 H2MEA7	-

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Summary

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