Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: PRRX1 ENSOCUG00000012272

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Description

paired related homeobox 1 [Source:NCBI gene (formerly Entrezgene);Acc:100354194]

Location

Chromosome 13: 22,829,234-22,911,022 forward strand.

OryCun2.0:CM000802.1

About this gene

This gene has 3 transcripts (splice variants), 217 orthologues and 40 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSOCUT00000012269.4	PRRX1-201	875	278aa	ENSOCUP00000010561.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G1T2Y3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSOCUT00000056271.1	PRRX1-202	909	250aa	ENSOCUP00000036384.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5F9CRS0	-
ENSOCUT00000055855.1	PRRX1-203	594	145aa	ENSOCUP00000038363.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5F9CXZ2	-

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Paralogues

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