Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: kdm5c ENSONIG00000016838

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Description

lysine demethylase 5C [Source:ZFIN;Acc:ZDB-GENE-060810-94]

Location

Primary_assembly LG20: 10,781,612-10,800,029 forward strand.

O_niloticus_UMD_NMBU:CM007501.2

About this gene

This gene has 8 transcripts (splice variants), 118 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSONIT00000052859.1	kdm5c-202	4987	1596aa	ENSONIP00000070171.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A669EGI5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSONIT00000072372.1	kdm5c-203	4930	1577aa	ENSONIP00000060936.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A669DR16	-
ENSONIT00000085572.1	kdm5c-201	4915	1572aa	ENSONIP00000056811.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A669D8C2	-
ENSONIT00000069789.1	kdm5c-208	4851	1586aa	ENSONIP00000057745.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A669DFS7	-
ENSONIT00000021237.2	kdm5c-204	4663	1488aa	ENSONIP00000021218.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3KJC3	-
ENSONIT00000072163.1	kdm5c-205	4660	1487aa	ENSONIP00000030307.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A669B3K6	-
ENSONIT00000056129.1	kdm5c-206	4600	1467aa	ENSONIP00000033196.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A669BCG7	-
ENSONIT00000056105.1	kdm5c-207	4558	1453aa	ENSONIP00000066348.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A669E0R6	-

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Summary

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