Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: vars1 ENSONIG00000013064

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Description

valyl-tRNA synthetase 1 [Source:ZFIN;Acc:ZDB-GENE-010601-1]

Location

Primary_assembly LG11: 23,848,545-23,864,017 forward strand.

O_niloticus_UMD_NMBU:CM007492.2

About this gene

This gene has 6 transcripts (splice variants), 197 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSONIT00000016441.2	vars1-201	4002	1322aa	ENSONIP00000016426.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3K5N1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSONIT00000016442.2	vars1-202	3804	1256aa	ENSONIP00000016427.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3K5N2	-
ENSONIT00000093556.1	vars1-203	3735	1233aa	ENSONIP00000037726.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSONIT00000034061.1	vars1-204	3723	1229aa	ENSONIP00000068167.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSONIT00000091826.1	vars1-205	3672	1212aa	ENSONIP00000043446.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSONIT00000092562.1	vars1-206	2667	888aa	ENSONIP00000033849.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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