Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: VPS41 ENSONIG00000006145

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Description

VPS41 subunit of HOPS complex [Source:ZFIN;Acc:ZDB-GENE-030131-6671]

Location

Primary_assembly LG9: 15,259,182-15,281,990 forward strand.

O_niloticus_UMD_NMBU:CM007490.2

About this gene

This gene has 10 transcripts (splice variants) and 209 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSONIT00000067526.1	VPS41-204	2672	862aa	ENSONIP00000068578.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A669E736	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSONIT00000072574.1	VPS41-201	3284	854aa	ENSONIP00000037763.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A669BQX5	-
ENSONIT00000075762.1	VPS41-202	3245	841aa	ENSONIP00000070467.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A669EHD1	-
ENSONIT00000090481.1	VPS41-203	3239	839aa	ENSONIP00000050341.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A669CSL2	-
ENSONIT00000034076.1	VPS41-205	2603	839aa	ENSONIP00000072173.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A669EH72	-
ENSONIT00000033632.1	VPS41-207	2564	826aa	ENSONIP00000063473.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A669DSE9	-
ENSONIT00000045121.1	VPS41-206	2561	825aa	ENSONIP00000078290.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A669EYU8	-
ENSONIT00000052269.1	VPS41-208	2495	803aa	ENSONIP00000033624.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A669BGH2	-
ENSONIT00000007744.2	VPS41-209	2250	749aa	ENSONIP00000007739.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3JFU8	-
ENSONIT00000079365.1	VPS41-210	1925	613aa	ENSONIP00000074465.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A669ESX8	-

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Summary

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