Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CCDC88A ENSONIG00000001005

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Description

coiled-coil domain containing 88A [Source:HGNC Symbol;Acc:HGNC:25523]

Location

Primary_assembly LG13: 10,480,257-10,543,352 reverse strand.

O_niloticus_UMD_NMBU:CM007494.2

About this gene

This gene has 10 transcripts (splice variants), 197 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSONIT00000048147.1	CCDC88A-209	5961	1986aa	ENSONIP00000069872.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSONIT00000051709.1	CCDC88A-208	5637	1878aa	ENSONIP00000052438.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSONIT00000054023.1	CCDC88A-210	5634	1594aa	ENSONIP00000055404.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSONIT00000001272.2	CCDC88A-201	5585	1844aa	ENSONIP00000001273.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3IXD3	-
ENSONIT00000080663.1	CCDC88A-203	5493	1830aa	ENSONIP00000063099.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSONIT00000058305.1	CCDC88A-202	5471	1806aa	ENSONIP00000074559.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSONIT00000085173.1	CCDC88A-204	5433	1810aa	ENSONIP00000031176.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSONIT00000067428.1	CCDC88A-205	5388	1795aa	ENSONIP00000071081.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSONIT00000060664.1	CCDC88A-207	5370	1789aa	ENSONIP00000066267.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSONIT00000064185.1	CCDC88A-206	5334	1777aa	ENSONIP00000059235.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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