Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: RPA1 ENSOKIG00005021545

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Description

replication protein A1 [Source:ZFIN;Acc:ZDB-GENE-030912-3]

Location

Primary_assembly LG18: 28,014,503-28,071,477 reverse strand.

Okis_V2:CM007735.2

About this gene

This gene has 10 transcripts (splice variants), 212 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSOKIT00005058796.1	RPA1-203	2141	620aa	ENSOKIP00005055403.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C7HBI5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSOKIT00005058876.1	RPA1-205	2157	609aa	ENSOKIP00005055480.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C7MHN4	-
ENSOKIT00005058831.1	RPA1-204	2069	596aa	ENSOKIP00005055436.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C7HHC2	-
ENSOKIT00005058777.1	RPA1-202	2033	614aa	ENSOKIP00005055385.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C7MI35	-
ENSOKIT00005059199.1	RPA1-208	1941	610aa	ENSOKIP00005055770.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C7HAX6	-
ENSOKIT00005059243.1	RPA1-209	1878	589aa	ENSOKIP00005055807.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C7HDA8	-
ENSOKIT00005059319.1	RPA1-210	1821	570aa	ENSOKIP00005055870.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C7HFK9	-
ENSOKIT00005059167.1	RPA1-207	1815	568aa	ENSOKIP00005055744.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C7MHS8	-
ENSOKIT00005059050.1	RPA1-206	1776	555aa	ENSOKIP00005055649.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C7MI78	-
ENSOKIT00005058768.1	RPA1-201	1758	585aa	ENSOKIP00005055377.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C7HCA0	-

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Summary

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