Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
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Ontologies
Phenotypes
Genetic Variation
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- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Htatsf1 MGP_SPRETEiJ_G0034249

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Description

HIV TAT specific factor 1 [Source:MGI Symbol;Acc:MGI:1919709]

Location

Chromosome X: 39,530,552-39,544,315 forward strand.

SPRET_EiJ_v1:CM004104.1

About this gene

This gene has 4 transcripts (splice variants) and 217 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_SPRETEiJ_T0095259.1	Htatsf1-202	2810	757aa	MGP_SPRETEiJ_P0095259	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_SPRETEiJ_T0095258.1	Htatsf1-201	1127	194aa	MGP_SPRETEiJ_P0095258	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_SPRETEiJ_T0095261.1	Htatsf1-204	2660	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_SPRETEiJ_T0095260.1	Htatsf1-203	2185	583aa	MGP_SPRETEiJ_P0095260	Unknown likely coding	-

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Summary

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