Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Rbpms MGP_SPRETEiJ_G0032087

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Description

RNA binding protein gene with multiple splicing [Source:MGI Symbol;Acc:MGI:1334446]

Location

Chromosome 8: 31,338,266-31,491,866 reverse strand.

SPRET_EiJ_v1:CM004101.1

About this gene

This gene has 14 transcripts (splice variants), 195 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_SPRETEiJ_T0087642.1	Rbpms-211	1046	220aa	MGP_SPRETEiJ_P0087642	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_SPRETEiJ_T0087633.1	Rbpms-202	2547	197aa	MGP_SPRETEiJ_P0087633	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_SPRETEiJ_T0087632.1	Rbpms-201	2456	197aa	MGP_SPRETEiJ_P0087632	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_SPRETEiJ_T0087634.1	Rbpms-203	2375	191aa	MGP_SPRETEiJ_P0087634	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_SPRETEiJ_T0087643.1	Rbpms-212	794	215aa	MGP_SPRETEiJ_P0087643	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_SPRETEiJ_T0087644.1	Rbpms-213	444	64aa	MGP_SPRETEiJ_P0087644	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_SPRETEiJ_T0087635.1	Rbpms-204	1389	197aa	MGP_SPRETEiJ_P0087635	Nonsense mediated decay	-
MGP_SPRETEiJ_T0087636.1	Rbpms-205	833	93aa	MGP_SPRETEiJ_P0087636	Nonsense mediated decay	-
MGP_SPRETEiJ_T0087637.1	Rbpms-206	549	70aa	MGP_SPRETEiJ_P0087637	Nonsense mediated decay	-
MGP_SPRETEiJ_T0087638.1	Rbpms-207	405	57aa	MGP_SPRETEiJ_P0087638	Nonsense mediated decay	-
MGP_SPRETEiJ_T0087639.1	Rbpms-208	643	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_SPRETEiJ_T0087645.1	Rbpms-214	324	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_SPRETEiJ_T0087640.1	Rbpms-209	525	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_SPRETEiJ_T0087641.1	Rbpms-210	189	62aa	MGP_SPRETEiJ_P0087641	Unknown likely coding	-

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Summary

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