Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: Cnot6l MGP_SPRETEiJ_G0028426

.

Description

CCR4-NOT transcription complex, subunit 6-like [Source:MGI Symbol;Acc:MGI:2443154]

Location

Chromosome 5: 93,952,371-94,037,557 reverse strand.

SPRET_EiJ_v1:CM004098.1

About this gene

This gene has 9 transcripts (splice variants), 217 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_SPRETEiJ_T0071855.1	Cnot6l-204	3198	555aa	MGP_SPRETEiJ_P0071855	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_SPRETEiJ_T0071852.1	Cnot6l-201	6167	550aa	MGP_SPRETEiJ_P0071852	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_SPRETEiJ_T0071857.1	Cnot6l-206	526	130aa	MGP_SPRETEiJ_P0071857	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_SPRETEiJ_T0071859.1	Cnot6l-208	421	87aa	MGP_SPRETEiJ_P0071859	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_SPRETEiJ_T0071858.1	Cnot6l-207	329	99aa	MGP_SPRETEiJ_P0071858	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_SPRETEiJ_T0071860.1	Cnot6l-209	254	55aa	MGP_SPRETEiJ_P0071860	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_SPRETEiJ_T0071854.1	Cnot6l-203	3342	46aa	MGP_SPRETEiJ_P0071854	Nonsense mediated decay	-
MGP_SPRETEiJ_T0071853.1	Cnot6l-202	3065	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_SPRETEiJ_T0071856.1	Cnot6l-205	789	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

.

Summary

.

.