Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Rpl9 MGP_SPRETEiJ_G0028242

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Description

ribosomal protein L9 [Source:MGI Symbol;Acc:MGI:1298373]

Location

Chromosome 5: 63,586,668-63,589,754 reverse strand.

SPRET_EiJ_v1:CM004098.1

About this gene

This gene has 9 transcripts (splice variants), 228 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_SPRETEiJ_T0070947.1	Rpl9-201	735	192aa	MGP_SPRETEiJ_P0070947	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_SPRETEiJ_T0070951.1	Rpl9-205	2706	108aa	MGP_SPRETEiJ_P0070951	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_SPRETEiJ_T0070949.1	Rpl9-203	1196	166aa	MGP_SPRETEiJ_P0070949	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_SPRETEiJ_T0070950.1	Rpl9-204	388	65aa	MGP_SPRETEiJ_P0070950	Nonsense mediated decay	-
MGP_SPRETEiJ_T0070952.1	Rpl9-206	2661	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_SPRETEiJ_T0070955.1	Rpl9-209	1742	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_SPRETEiJ_T0070954.1	Rpl9-208	1594	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_SPRETEiJ_T0070953.1	Rpl9-207	458	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_SPRETEiJ_T0070948.1	Rpl9-202	435	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

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Summary

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