Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Chd7 MGP_SPRETEiJ_G0026745

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Description

chromodomain helicase DNA binding protein 7 [Source:MGI Symbol;Acc:MGI:2444748]

Location

Chromosome 4: 5,154,346-5,334,205 forward strand.

SPRET_EiJ_v1:CM004097.1

About this gene

This gene has 8 transcripts (splice variants), 136 orthologues and 30 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_SPRETEiJ_T0063797.1	Chd7-204	10212	2986aa	MGP_SPRETEiJ_P0063797	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_SPRETEiJ_T0063796.1	Chd7-203	9439	2986aa	MGP_SPRETEiJ_P0063796	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_SPRETEiJ_T0063799.1	Chd7-206	3457	941aa	MGP_SPRETEiJ_P0063799	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_SPRETEiJ_T0063795.1	Chd7-202	2375	631aa	MGP_SPRETEiJ_P0063795	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_SPRETEiJ_T0063798.1	Chd7-205	439	19aa	MGP_SPRETEiJ_P0063798	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_SPRETEiJ_T0063801.1	Chd7-208	741	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_SPRETEiJ_T0063794.1	Chd7-201	4862	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_SPRETEiJ_T0063800.1	Chd7-207	8958	2985aa	MGP_SPRETEiJ_P0063800	Unknown likely coding	-

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Summary

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