Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Rtca MGP_SPRETEiJ_G0026515

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Description

RNA 3'-terminal phosphate cyclase [Source:MGI Symbol;Acc:MGI:1913618]

Location

Chromosome 3: 114,973,052-114,996,874 reverse strand.

SPRET_EiJ_v1:CM004096.1

About this gene

This gene has 5 transcripts (splice variants), 212 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_SPRETEiJ_T0062513.1	Rtca-201	1577	366aa	MGP_SPRETEiJ_P0062513	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_SPRETEiJ_T0062516.1	Rtca-204	712	142aa	MGP_SPRETEiJ_P0062516	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_SPRETEiJ_T0062515.1	Rtca-203	876	52aa	MGP_SPRETEiJ_P0062515	Nonsense mediated decay	-
MGP_SPRETEiJ_T0062517.1	Rtca-205	737	113aa	MGP_SPRETEiJ_P0062517	Nonsense mediated decay	-
MGP_SPRETEiJ_T0062514.1	Rtca-202	621	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

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Summary

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