Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Fxr1 MGP_SPRETEiJ_G0025861

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Description

fragile X mental retardation gene 1, autosomal homolog [Source:MGI Symbol;Acc:MGI:104860]

Location

Chromosome 3: 30,897,259-30,948,812 forward strand.

SPRET_EiJ_v1:CM004096.1

About this gene

This gene has 7 transcripts (splice variants), 223 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_SPRETEiJ_T0059563.1	Fxr1-201	2356	677aa	MGP_SPRETEiJ_P0059563	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_SPRETEiJ_T0059565.1	Fxr1-203	2129	621aa	MGP_SPRETEiJ_P0059565	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_SPRETEiJ_T0059566.1	Fxr1-204	1953	650aa	MGP_SPRETEiJ_P0059566	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_SPRETEiJ_T0059568.1	Fxr1-206	642	130aa	MGP_SPRETEiJ_P0059568	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_SPRETEiJ_T0059564.1	Fxr1-202	2158	54aa	MGP_SPRETEiJ_P0059564	Nonsense mediated decay	-
MGP_SPRETEiJ_T0059569.1	Fxr1-207	2485	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_SPRETEiJ_T0059567.1	Fxr1-205	651	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

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Summary

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