Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Tnrc6c MGP_SPRETEiJ_G0018309

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Description

trinucleotide repeat containing 6C [Source:MGI Symbol;Acc:MGI:2443265]

Location

Chromosome 11: 120,441,706-120,560,443 forward strand.

SPRET_EiJ_v1:CM004105.1

About this gene

This gene has 7 transcripts (splice variants), 188 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_SPRETEiJ_T0032705.1	Tnrc6c-203	8850	1900aa	MGP_SPRETEiJ_P0032705	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_SPRETEiJ_T0032703.1	Tnrc6c-201	8712	1900aa	MGP_SPRETEiJ_P0032703	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_SPRETEiJ_T0032707.1	Tnrc6c-205	6612	1732aa	MGP_SPRETEiJ_P0032707	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_SPRETEiJ_T0032704.1	Tnrc6c-202	11571	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_SPRETEiJ_T0032709.1	Tnrc6c-207	1805	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_SPRETEiJ_T0032708.1	Tnrc6c-206	743	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_SPRETEiJ_T0032706.1	Tnrc6c-204	5760	1919aa	MGP_SPRETEiJ_P0032706	Unknown likely coding	-

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Summary

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