Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: R3hdm1 MGP_PahariEiJ_G0027779

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Description

R3H domain containing 1 [Source:NCBI gene;Acc:110322479]

Location

Chromosome 5: 102,579,626-102,715,259 forward strand.

PAHARI_EIJ_v1.1:LT608292.1

About this gene

This gene has 16 transcripts (splice variants), 209 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_PahariEiJ_T0074921.1	R3hdm1-203	4789	1134aa	MGP_PahariEiJ_P0074921	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PahariEiJ_T0074922.1	R3hdm1-204	3970	548aa	MGP_PahariEiJ_P0074922	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0074924.1	R3hdm1-206	1651	486aa	MGP_PahariEiJ_P0074924	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0074931.1	R3hdm1-213	1155	385aa	MGP_PahariEiJ_P0074931	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0074920.1	R3hdm1-202	1130	239aa	MGP_PahariEiJ_P0074920	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0074926.1	R3hdm1-208	1037	286aa	MGP_PahariEiJ_P0074926	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0074930.1	R3hdm1-212	549	182aa	MGP_PahariEiJ_P0074930	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0074925.1	R3hdm1-207	453	32aa	MGP_PahariEiJ_P0074925	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0074923.1	R3hdm1-205	8017	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0074933.1	R3hdm1-215	6196	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0074927.1	R3hdm1-209	6024	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0074929.1	R3hdm1-211	4973	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0074932.1	R3hdm1-214	3626	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0074919.1	R3hdm1-201	2435	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0074934.1	R3hdm1-216	1584	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0074928.1	R3hdm1-210	611	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

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Summary

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