Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Fubp3 MGP_PahariEiJ_G0024870

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Description

far upstream element binding protein 3 [Source:NCBI gene;Acc:110318097]

Location

Chromosome 3: 18,851,813-18,897,707 forward strand.

PAHARI_EIJ_v1.1:LT608290.1

About this gene

This gene has 11 transcripts (splice variants), 275 orthologues and 13 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_PahariEiJ_T0061986.1	Fubp3-205	3660	575aa	MGP_PahariEiJ_P0061986	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PahariEiJ_T0061982.1	Fubp3-201	3288	569aa	MGP_PahariEiJ_P0061982	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0061989.1	Fubp3-208	1071	263aa	MGP_PahariEiJ_P0061989	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0061990.1	Fubp3-209	833	103aa	MGP_PahariEiJ_P0061990	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0061991.1	Fubp3-210	433	52aa	MGP_PahariEiJ_P0061991	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0061985.1	Fubp3-204	425	123aa	MGP_PahariEiJ_P0061985	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0061983.1	Fubp3-202	372	97aa	MGP_PahariEiJ_P0061983	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0061988.1	Fubp3-207	908	191aa	MGP_PahariEiJ_P0061988	Nonsense mediated decay	-
MGP_PahariEiJ_T0061987.1	Fubp3-206	453	83aa	MGP_PahariEiJ_P0061987	Nonsense mediated decay	-
MGP_PahariEiJ_T0061992.1	Fubp3-211	2257	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0061984.1	Fubp3-203	1947	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

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Summary

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