Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Serbp1 MGP_PahariEiJ_G0022208

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Description

SERPINE1 mRNA binding protein 1 [Source:NCBI gene;Acc:110316186]

Location

Chromosome 2: 85,166,176-85,209,034 forward strand.

PAHARI_EIJ_v1.1:LT608286.1

About this gene

This gene has 15 transcripts (splice variants), 292 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_PahariEiJ_T0050254.1	Serbp1-202	1666	401aa	MGP_PahariEiJ_P0050254	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PahariEiJ_T0050259.1	Serbp1-207	1616	392aa	MGP_PahariEiJ_P0050259	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0050257.1	Serbp1-205	1336	386aa	MGP_PahariEiJ_P0050257	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0050256.1	Serbp1-204	1287	362aa	MGP_PahariEiJ_P0050256	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0050263.1	Serbp1-211	717	211aa	MGP_PahariEiJ_P0050263	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0050265.1	Serbp1-213	558	185aa	MGP_PahariEiJ_P0050265	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0050260.1	Serbp1-208	1166	147aa	MGP_PahariEiJ_P0050260	Nonsense mediated decay	-
MGP_PahariEiJ_T0050266.1	Serbp1-214	612	74aa	MGP_PahariEiJ_P0050266	Nonsense mediated decay	-
MGP_PahariEiJ_T0050262.1	Serbp1-210	600	155aa	MGP_PahariEiJ_P0050262	Nonsense mediated decay	-
MGP_PahariEiJ_T0050253.1	Serbp1-201	400	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_PahariEiJ_T0050261.1	Serbp1-209	3148	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0050255.1	Serbp1-203	2352	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0050258.1	Serbp1-206	1905	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0050264.1	Serbp1-212	836	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0050267.1	Serbp1-215	665	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

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Summary

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