Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Cnot7 MGP_PahariEiJ_G0021462

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Description

CCR4-NOT transcription complex subunit 7 [Source:NCBI gene;Acc:110336174]

Location

Chromosome 19: 57,151,685-57,175,028 reverse strand.

PAHARI_EIJ_v1.1:LT608297.1

About this gene

This gene has 12 transcripts (splice variants), 229 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_PahariEiJ_T0047129.1	Cnot7-206	3001	285aa	MGP_PahariEiJ_P0047129	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PahariEiJ_T0047125.1	Cnot7-202	2617	285aa	MGP_PahariEiJ_P0047125	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0047126.1	Cnot7-203	2543	285aa	MGP_PahariEiJ_P0047126	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0047128.1	Cnot7-205	2462	248aa	MGP_PahariEiJ_P0047128	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0047134.1	Cnot7-210	726	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_PahariEiJ_T0047130.1	Cnot7-207	681	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_PahariEiJ_T0047135.1	Cnot7-211	484	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_PahariEiJ_T0047136.1	Cnot7-212	425	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_PahariEiJ_T0047133.1	Cnot7-209	303	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_PahariEiJ_T0047127.1	Cnot7-204	3842	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0047131.1	Cnot7-208	842	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0047124.1	Cnot7-201	2063	179aa	MGP_PahariEiJ_P0047124	Unknown likely coding	-

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Summary

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