Summary
- Splice variants
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- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
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- Orthologues
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Gene: Sgf29 MGP_PahariEiJ_G0013666

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Description

SAGA complex associated factor 29 [Source:NCBI gene;Acc:110325694]

Location

Chromosome 1: 96,115,456-96,138,311 forward strand.

PAHARI_EIJ_v1.1:LT608296.1

About this gene

This gene has 10 transcripts (splice variants) and 196 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_PahariEiJ_T0018971.1	Sgf29-202	1312	293aa	MGP_PahariEiJ_P0018971	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PahariEiJ_T0018978.1	Sgf29-209	511	159aa	MGP_PahariEiJ_P0018978	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0018972.1	Sgf29-203	461	18aa	MGP_PahariEiJ_P0018972	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0018975.1	Sgf29-206	777	163aa	MGP_PahariEiJ_P0018975	Nonsense mediated decay	-
MGP_PahariEiJ_T0018976.1	Sgf29-207	732	152aa	MGP_PahariEiJ_P0018976	Nonsense mediated decay	-
MGP_PahariEiJ_T0018979.1	Sgf29-210	416	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_PahariEiJ_T0018970.1	Sgf29-201	367	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_PahariEiJ_T0018974.1	Sgf29-205	786	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0018973.1	Sgf29-204	427	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0018977.1	Sgf29-208	345	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

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Summary

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