Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Zkscan5 MGP_PahariEiJ_G0024584

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Description

zinc finger with KRAB and SCAN domains 5 [Source:NCBI gene;Acc:110339080]

Location

Chromosome 23: 35,270,659-35,289,661 forward strand.

PAHARI_EIJ_v1.1:LT608309.1

About this gene

This gene has 6 transcripts (splice variants), 90 orthologues and 109 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_PahariEiJ_T0060363.1	Zkscan5-201	3781	822aa	MGP_PahariEiJ_P0060363	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PahariEiJ_T0060364.1	Zkscan5-202	3456	749aa	MGP_PahariEiJ_P0060364	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0060367.1	Zkscan5-205	443	147aa	MGP_PahariEiJ_P0060367	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0060365.1	Zkscan5-203	1225	219aa	MGP_PahariEiJ_P0060365	Nonsense mediated decay	-
MGP_PahariEiJ_T0060366.1	Zkscan5-204	622	51aa	MGP_PahariEiJ_P0060366	Nonsense mediated decay	-
MGP_PahariEiJ_T0060368.1	Zkscan5-206	395	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-

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Summary

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