Description
valyl-tRNA synthetase 2, mitochondrial [Source:NCBI gene;Acc:110335600]
Location
Chromosome 18: 3,591,001-3,603,357 reverse strand.
PAHARI_EIJ_v1.1:LT608302.1
About this gene
This gene has 13 transcripts (splice variants), 180 orthologues and 7 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | Flags |
|---|---|---|---|---|---|---|
| MGP_PahariEiJ_T0044064.1 | Vars2-201 | 4652 | 1060aa | MGP_PahariEiJ_P0044064 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, |
| MGP_PahariEiJ_T0044067.1 | Vars2-204 | 2515 | 582aa | MGP_PahariEiJ_P0044067 | Nonsense mediated decay | - |
| MGP_PahariEiJ_T0044068.1 | Vars2-205 | 1972 | 214aa | MGP_PahariEiJ_P0044068 | Nonsense mediated decay | - |
| MGP_PahariEiJ_T0044072.1 | Vars2-209 | 832 | 112aa | MGP_PahariEiJ_P0044072 | Nonsense mediated decay | - |
| MGP_PahariEiJ_T0044076.1 | Vars2-213 | 715 | 75aa | MGP_PahariEiJ_P0044076 | Nonsense mediated decay | - |
| MGP_PahariEiJ_T0044065.1 | Vars2-202 | 3816 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - |
| MGP_PahariEiJ_T0044075.1 | Vars2-212 | 783 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - |
| MGP_PahariEiJ_T0044073.1 | Vars2-210 | 730 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - |
| MGP_PahariEiJ_T0044069.1 | Vars2-206 | 721 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - |
| MGP_PahariEiJ_T0044074.1 | Vars2-211 | 618 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - |
| MGP_PahariEiJ_T0044070.1 | Vars2-207 | 591 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - |
| MGP_PahariEiJ_T0044071.1 | Vars2-208 | 317 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - |
| MGP_PahariEiJ_T0044066.1 | Vars2-203 | 3605 | 1063aa | MGP_PahariEiJ_P0044066 | Unknown likely coding | - |
