Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Ctdnep1 MGP_PahariEiJ_G0017741

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Description

CTD nuclear envelope phosphatase 1 [Source:MGI Symbol;Acc:MGI:1914431]

Location

Chromosome 14: 37,822,566-37,831,577 forward strand.

PAHARI_EIJ_v1.1:LT608308.1

About this gene

This gene has 5 transcripts (splice variants), 232 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_PahariEiJ_T0034462.1	Ctdnep1-201	1643	244aa	MGP_PahariEiJ_P0034462	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PahariEiJ_T0034463.1	Ctdnep1-202	614	89aa	MGP_PahariEiJ_P0034463	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0034466.1	Ctdnep1-205	655	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_PahariEiJ_T0034465.1	Ctdnep1-204	690	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0034464.1	Ctdnep1-203	649	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

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Gene tree

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