Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
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Gene expression
Pathway
Molecular interactions
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- Gene history

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Gene: L1td1 MGP_PahariEiJ_G0028522

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Description

LINE-1 type transposase domain containing 1 [Source:MGI Symbol;Acc:MGI:3578435]

Location

Chromosome 6: 49,796,908-49,809,402 forward strand.

PAHARI_EIJ_v1.1:LT608307.1

About this gene

This gene has 3 transcripts (splice variants) and 1018 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_PahariEiJ_T0078190.1	L1td1-202	3039	816aa	MGP_PahariEiJ_P0078190	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PahariEiJ_T0078189.1	L1td1-201	741	153aa	MGP_PahariEiJ_P0078189	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0078191.1	L1td1-203	466	120aa	MGP_PahariEiJ_P0078191	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data